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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015849888.1_cds_XP_016510976.1_23761
CDS Infomation

[gene=LOC107828215] [db_xref=GeneID:107828215] [protein=uncharacterized protein LOC107828215] [protein_id=XP_016510976.1] [location=join(4346..4528,4631..4978,5140..5193,5296..5544,5649..5735,6098..6155,20914..21812)] [gbkey=CDS]
Sequence

ATGGTAGATGGCAAGTGGAAGAAGGAACGATTTCGTGAGAAGTACTGGTACCAGTGGGAG
AGATGCAATGCAATAGTACTGTCCTGGTTAATGAATTATGTTGCTCAGAACTTGATTAGT
GAAATTGCATACACTACGAATGCTCAAACACTCTTGAAGGAGTTACGTGAGAGATTTGAC
AAAGATGAATTTGAGGCATTAGTGCCACTACCTGATTGTGACTGCTCTAAGTCTAAAGAT
TGTGTGGTGTTTCTCCAAAGACTGAAGCTGTATCAATTTTTCATGGGCCTAAATGCCAAC
TATCTTCAAGCTAGAAGTCAGATTTTACTCATGTTCCCATTACCTACTGTGAATCAAACA
TACGCTATGCTTATCAGTGATGAAATCCAAAAGGCTATTGATGTTAACTCTGGTATTCTG
GGTGCTTCCCCTCCTAATATAAACCCAGGAAGATATGATTCTACTACTCTATATAGCTCT
AAAACTGGAGGAAATCAAAAGTTTAGGAAAAATTACAATTTCTACTGTGAGATGTCAGCT
CAGGTGACTGGTCAGTACATGGAGACTCAGCATGCTCAAAGAGAGGTTTCCCCTTCAACT
ATTAGTGCCAATACAACAGGTACAAGTAGTGTTTTCTTATTGTCTGATAGTAAGTCGGAT
TGGATCATTGATACATTAGCCACAAATCATATGGTATCTGATGTTAACTTGCTCAATAAG
TCTTCAATTAGTGAACTTATTGTGCCTAGGAAAGTGTTTCTACCAAATAGATACATTTCC
CATGTAGCTCATGTTGGAACTAGTTCTATATCTGATAACAACTACCTCAGGAATGATCTC
TCCATTGGGAAGGTGAAGGCGATTGGTAAGGAGTATAATGAGTTGTACTTGTTGCATAGA
CACAATGCAAGGACCAATAAGTTCCTTGTCTTTGTTCAAACTCAGTTTCAAAAGACATTG
AAGGTAGTCAGAATTGACAGTCTGTTCAGGACTCTTGGAATTGCACATCAGAGAACTTGT
GCTTACACCCCTCAACAAAATGGCATAGCTGAGAGAAAGTACAAACATATTCTAGAGGTG
ACTAGGGCTATTAGGTTCCAAGCACATATACCAATCAAGTTTTGGGGGAACTATGTCTTT
GCAGCTATGTACCTCATTAATAGAATGCCTTTCCCAGTTATAGGTGGAGTTTCTCCCTAT
GAGAGGTTGTATGCTAAGAAGCCCGATCTTGGCCACTTAAGAGTAATTGGCTGCTTATGT
TATGCAAAGCAGATCCATAAGGCAGACAAGCTTTTATCCAGAGTTAATCCTACAGTCCAT
ATGGGATATTCTCCTACTCAAAAGGGCTATATCTTGTATGATCTTACTTCTCATTCTTTT
GTTGTTAGAAGGGATGTGGCATGCAGAGAGGAGGTGTTCCTATTTTCCAGCAGCAAGTTT
GTTCCACCACCTCAATTTGTTGATTCCCATTCTTTTTCACACCATTATGAAACTCCTGGG
ATTGCTCACACCCTCAATGATCCTGCAACCATAGAGGTGGAGGATGAAGATCTCACACAT
TGGTTATGTCAGTCACCTATTGTGGGAAGTCCTATTAGCACCAGGTGTGTTGACACCACC
ACCTATTCTCAAAGAATCTCTGCAGATTTACTTACACAAGACATTAATCCTACCTTAAGG
AAGTCCACTAGACCTAAACAAACTCCCATTTGGATGAAAAACTTTATTTCTCTCAACATT
TACAAAGATGTTCCATATGCTATCTCAAACTACTTGTCTTATGGCACACTGTCTCCTAAG
TATCATGCTTACATTGCAGCCACTTTAACTATAGTTGAACCTTCTTCCTATGAGGCAGCT
GTTAAAGATCCAAGATGA

Peptide Sequence

PEP ID

XP_016510976.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107828215 [Nicotiana tabacum]
Sequence

MVDGKWKKERFREKYWYQWERCNAIVLSWLMNYVAQNLISEIAYTTNAQTLLKELRERFD
KDEFEALVPLPDCDCSKSKDCVVFLQRLKLYQFFMGLNANYLQARSQILLMFPLPTVNQT
YAMLISDEIQKAIDVNSGILGASPPNINPGRYDSTTLYSSKTGGNQKFRKNYNFYCEMSA
QVTGQYMETQHAQREVSPSTISANTTGTSSVFLLSDSKSDWIIDTLATNHMVSDVNLLNK
SSISELIVPRKVFLPNRYISHVAHVGTSSISDNNYLRNDLSIGKVKAIGKEYNELYLLHR
HNARTNKFLVFVQTQFQKTLKVVRIDSLFRTLGIAHQRTCAYTPQQNGIAERKYKHILEV
TRAIRFQAHIPIKFWGNYVFAAMYLINRMPFPVIGGVSPYERLYAKKPDLGHLRVIGCLC
YAKQIHKADKLLSRVNPTVHMGYSPTQKGYILYDLTSHSFVVRRDVACREEVFLFSSSKF
VPPPQFVDSHSFSHHYETPGIAHTLNDPATIEVEDEDLTHWLCQSPIVGSPISTRCVDTT
TYSQRISADLLTQDINPTLRKSTRPKQTPIWMKNFISLNIYKDVPYAISNYLSYGTLSPK
YHAYIAATLTIVEPSSYEAAVKDPR

Transcript Sequence

Gene sequence data has not been registered.